Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM4Q8WVI0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 KRT8P49-201ENST00000604166 1432 ntBASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AP002414.2-201ENST00000591780 3365 ntBASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 PRAL-201ENST00000624952 3286 ntBASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 AL009178.2-201ENST00000597278 2719 ntBASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.34□□□□□ -0.11
SMIM4Q8WVI0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 AC125634.1-201ENST00000438758 1403 ntBASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM4Q8WVI0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 FAM220CP-201ENST00000395253 831 ntBASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 ZNF444P1-201ENST00000559497 298 ntBASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms