Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 AC091804.1-201ENST00000486888 567 ntBASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 AL607033.1-201ENST00000623900 1599 ntBASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 YBX1P6-201ENST00000442962 1002 ntBASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 UPF3AP2-201ENST00000457924 1132 ntBASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
PRUNE2Q8WUY3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AC097724.1-201ENST00000609581 426 ntBASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AL022328.3-201ENST00000607943 679 ntBASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRUNE2Q8WUY3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 FTH1P14-201ENST00000482930 551 ntBASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 CASP16P-204ENST00000635032 809 ntBASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PRUNE2Q8WUY3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms