Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 PRYP5-201ENST00000451909 266 ntBASIC25.04■■□□□ 1.6
CCER1Q8TC90 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 IGHV3OR16-7-201ENST00000604106 360 ntBASIC25.04■■□□□ 1.6
CCER1Q8TC90 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC25.04■■□□□ 1.6
CCER1Q8TC90 AC022188.1-201ENST00000620960 1664 ntBASIC25.04■■□□□ 1.6
CCER1Q8TC90 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCER1Q8TC90 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 KRT16P4-201ENST00000453883 522 ntBASIC25.03■■□□□ 1.6
CCER1Q8TC90 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 NKAPP1-205ENST00000585790 367 ntBASIC25.03■■□□□ 1.6
CCER1Q8TC90 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 BLK-205ENST00000529894 2017 ntTSL 5 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CCER1Q8TC90 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCER1Q8TC90 NCF1C-201ENST00000438382 1427 ntBASIC25.03■■□□□ 1.6
CCER1Q8TC90 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 AL732292.2-201ENST00000609649 430 ntBASIC25.02■■□□□ 1.6
CCER1Q8TC90 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 SNX33P1-201ENST00000592116 1762 ntBASIC25.02■■□□□ 1.6
CCER1Q8TC90 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCER1Q8TC90 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC25.02■■□□□ 1.6
CCER1Q8TC90 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCER1Q8TC90 MTHFR-217ENST00000641820 1569 ntBASIC25.01■■□□□ 1.59
CCER1Q8TC90 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCER1Q8TC90 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 ACE-204ENST00000428043 5120 ntTSL 2 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCER1Q8TC90 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCER1Q8TC90 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCER1Q8TC90 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCER1Q8TC90 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCER1Q8TC90 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CCER1Q8TC90 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCER1Q8TC90 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms