Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 RN7SL204P-201ENST00000582831 262 ntBASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 AL031055.1-201ENST00000606362 631 ntBASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 AL358472.5-202ENST00000641448 1267 ntBASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-3Q8TAU0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 ALOX12P2-203ENST00000570921 1945 ntBASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AC020916.1-201ENST00000587762 1774 ntBASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AL031731.1-201ENST00000642131 2094 ntBASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NKX2-3Q8TAU0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 KRT8P39-201ENST00000396270 1433 ntBASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 AC084018.2-201ENST00000613093 2607 ntBASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 KRT8P48-201ENST00000515599 1220 ntBASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 AC112191.1-201ENST00000523689 701 ntBASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.69■□□□□ 0.74
NKX2-3Q8TAU0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms