Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 AC093503.3-201ENST00000624917 2352 ntBASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 AC026954.1-201ENST00000429771 1293 ntBASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 TIMM17BP1-201ENST00000545713 516 ntBASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL22A1Q8NFW1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 FO393414.2-201ENST00000405153 598 ntBASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 AC012441.1-201ENST00000446669 685 ntBASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 AL359711.2-201ENST00000563105 872 ntBASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 AL049840.4-201ENST00000602422 811 ntBASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 AC015967.2-201ENST00000624092 234 ntBASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 AC006435.4-201ENST00000625037 234 ntBASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 AL356737.1-201ENST00000634391 234 ntBASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.86■■□□□ 1.09
COL22A1Q8NFW1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 SLC25A24P2-201ENST00000415059 510 ntBASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 SOCS2P1-201ENST00000417727 557 ntBASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 AC012317.2-201ENST00000623305 2251 ntBASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
COL22A1Q8NFW1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 AL118558.3-201ENST00000607414 1079 ntBASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 AL136982.4-201ENST00000437689 1740 ntBASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 RPL13P2-201ENST00000440687 659 ntBASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms