Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 ZNF444P1-201ENST00000559497 298 ntBASIC15.43■□□□□ 0.06
SETD9Q8NE22 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 FAM87A-204ENST00000613235 858 ntBASIC15.43■□□□□ 0.06
SETD9Q8NE22 AC073912.3-201ENST00000624414 853 ntBASIC15.43■□□□□ 0.06
SETD9Q8NE22 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 GGT3P-204ENST00000453783 1664 ntBASIC15.43■□□□□ 0.06
SETD9Q8NE22 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 AC073347.1-201ENST00000421633 2643 ntBASIC15.43■□□□□ 0.06
SETD9Q8NE22 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SETD9Q8NE22 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.43■□□□□ 0.06
SETD9Q8NE22 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 AL353593.2-201ENST00000602529 1483 ntBASIC15.42■□□□□ 0.06
SETD9Q8NE22 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 AC003669.1-201ENST00000334569 611 ntBASIC15.42■□□□□ 0.06
SETD9Q8NE22 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 AC142381.4-202ENST00000563973 229 ntBASIC15.42■□□□□ 0.06
SETD9Q8NE22 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SETD9Q8NE22 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.42■□□□□ 0.06
SETD9Q8NE22 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
SETD9Q8NE22 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SETD9Q8NE22 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SETD9Q8NE22 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SETD9Q8NE22 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SETD9Q8NE22 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SETD9Q8NE22 FAM220CP-201ENST00000395253 831 ntBASIC15.41■□□□□ 0.06
SETD9Q8NE22 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SETD9Q8NE22 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SETD9Q8NE22 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 DUX4L17-201ENST00000557360 1267 ntBASIC15.41■□□□□ 0.06
SETD9Q8NE22 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 MIR4651-201ENST00000582622 73 ntBASIC15.41■□□□□ 0.06
SETD9Q8NE22 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.41■□□□□ 0.06
SETD9Q8NE22 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms