Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 AL603756.1-201ENST00000606511 2163 ntBASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 AC107918.2-201ENST00000530817 355 ntBASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 AC005593.1-201ENST00000624894 515 ntBASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIMC1Q8NDZ2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 AC009947.1-201ENST00000444350 727 ntBASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 RNA5SP415-201ENST00000517246 115 ntBASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 AF228730.7-201ENST00000641842 219 ntBASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SIMC1Q8NDZ2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 SLC25A1P1-201ENST00000528351 927 ntBASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.8■□□□□ 0.12
SIMC1Q8NDZ2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms