Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 AL133215.2-201ENST00000609242 977 ntBASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CARMIL3Q8ND23 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 AL138688.1-201ENST00000624851 1594 ntBASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CARMIL3Q8ND23 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 RNA5SP410-201ENST00000516285 106 ntBASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 AL079307.3-201ENST00000556114 283 ntBASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 BTBD7P1-201ENST00000447253 1453 ntBASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CARMIL3Q8ND23 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.77■□□□□ 0.91
CARMIL3Q8ND23 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CARMIL3Q8ND23 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CARMIL3Q8ND23 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 AC098614.1-201ENST00000368528 745 ntBASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 MIR1909-201ENST00000411312 80 ntBASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 DFFBP1-201ENST00000433250 979 ntBASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 AC098859.1-201ENST00000502915 1238 ntBASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 AC135586.1-201ENST00000539323 574 ntBASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms