Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LSMEM1Q8N8F7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 AC006449.5-201ENST00000610658 2098 ntBASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 RPS15P9-201ENST00000494093 319 ntBASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 SLC25A6P2-201ENST00000497974 877 ntBASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 RNPS1P1-201ENST00000507437 918 ntBASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 UNC93B7-201ENST00000509439 705 ntBASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSMEM1Q8N8F7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 SNX33P1-201ENST00000592116 1762 ntBASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 AC136632.2-201ENST00000512891 861 ntBASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 PKD1P1-201ENST00000458669 6805 ntBASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSMEM1Q8N8F7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC131009.4-201ENST00000624048 1740 ntBASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 ME2P1-201ENST00000426028 1970 ntBASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 RPS2P1-201ENST00000434010 821 ntBASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms