Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 ADH5P3-201ENST00000433842 1137 ntBASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAM1L1Q8N609 AL031731.1-201ENST00000642131 2094 ntBASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 AKAP8P1-201ENST00000434743 1349 ntBASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 AC211486.1-202ENST00000416371 468 ntBASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 AGGF1P2-201ENST00000426656 2106 ntBASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 AC211476.1-201ENST00000503899 468 ntBASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 AC016027.1-202ENST00000607927 1699 ntBASIC16.5■□□□□ 0.23
TRAM1L1Q8N609 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 TFAMP1-201ENST00000412727 736 ntBASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 RN7SL589P-201ENST00000481268 310 ntBASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 KRT18P34-201ENST00000488218 1270 ntBASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms