Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 AC018845.2-201ENST00000568326 409 ntBASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 AC002347.1-201ENST00000569543 541 ntBASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB42Q8N4Z0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 HLA-J-202ENST00000469281 1241 ntBASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 MIR4492-201ENST00000581627 80 ntBASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 SLC22A20-204ENST00000530038 1673 ntBASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 AD000864.1-201ENST00000624076 2295 ntBASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB42Q8N4Z0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 AC025580.3-201ENST00000617932 1424 ntBASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 POLD2P1-201ENST00000511220 997 ntBASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 KRT19P2-202ENST00000557173 1012 ntBASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB42Q8N4Z0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms