Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 OR8S1-201ENST00000310194 1080 ntBASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 AL359881.2-201ENST00000602973 570 ntBASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 AC003101.2-201ENST00000612557 442 ntBASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 AC016396.2-201ENST00000562575 1417 ntBASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SYNPOQ8N3V7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 HLA-J-202ENST00000469281 1241 ntBASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 KRT8P49-201ENST00000604166 1432 ntBASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SYNPOQ8N3V7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms