Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 AL512356.2-201ENST00000546955 174 ntBASIC16.98■□□□□ 0.31
PGBD3Q8N328 AC190387.1-201ENST00000551683 408 ntBASIC16.98■□□□□ 0.31
PGBD3Q8N328 KRT8P23-201ENST00000560090 1207 ntBASIC16.98■□□□□ 0.31
PGBD3Q8N328 AC026150.2-201ENST00000564693 1156 ntBASIC16.98■□□□□ 0.31
PGBD3Q8N328 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 AC051619.7-201ENST00000568314 623 ntBASIC16.98■□□□□ 0.31
PGBD3Q8N328 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.98■□□□□ 0.31
PGBD3Q8N328 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PGBD3Q8N328 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 AL023806.1-201ENST00000603994 1649 ntBASIC16.97■□□□□ 0.31
PGBD3Q8N328 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 HCG4-201ENST00000418983 998 ntBASIC16.97■□□□□ 0.31
PGBD3Q8N328 TREML5P-201ENST00000421694 576 ntBASIC16.97■□□□□ 0.31
PGBD3Q8N328 AC244107.1-201ENST00000442033 332 ntBASIC16.97■□□□□ 0.31
PGBD3Q8N328 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 MIR6080-201ENST00000617359 66 ntBASIC16.97■□□□□ 0.31
PGBD3Q8N328 AL390754.1-201ENST00000619088 582 ntBASIC16.97■□□□□ 0.31
PGBD3Q8N328 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 FO538757.1-201ENST00000623083 1397 ntBASIC16.97■□□□□ 0.31
PGBD3Q8N328 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 AC008677.1-201ENST00000519230 1561 ntBASIC16.97■□□□□ 0.31
PGBD3Q8N328 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.97■□□□□ 0.31
PGBD3Q8N328 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PGBD3Q8N328 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 WASH6P-202ENST00000359512 1437 ntBASIC16.96■□□□□ 0.31
PGBD3Q8N328 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PGBD3Q8N328 GPS2P2-201ENST00000430745 888 ntBASIC16.96■□□□□ 0.31
PGBD3Q8N328 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 TSPY16P-201ENST00000449843 468 ntBASIC16.96■□□□□ 0.31
PGBD3Q8N328 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 AP001350.2-201ENST00000625104 1094 ntBASIC16.96■□□□□ 0.31
PGBD3Q8N328 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 AL138688.1-201ENST00000624851 1594 ntBASIC16.96■□□□□ 0.31
PGBD3Q8N328 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.96■□□□□ 0.31
PGBD3Q8N328 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms