Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 AL021920.2-201ENST00000624828 1351 ntBASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 HLA-V-204ENST00000476601 1289 ntBASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 AC073389.1-201ENST00000595595 795 ntBASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TMEFF1Q8IYR6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 MTND6P24-201ENST00000440466 518 ntBASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 LINC00895-201ENST00000629028 1637 ntBASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEFF1Q8IYR6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 PRYP6-201ENST00000514804 343 ntBASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms