Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC23.33■■□□□ 1.32
UBR1Q8IWV7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
UBR1Q8IWV7 AC243960.2-201ENST00000600996 747 ntBASIC23.33■■□□□ 1.32
UBR1Q8IWV7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
UBR1Q8IWV7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC23.33■■□□□ 1.32
UBR1Q8IWV7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 FO681548.1-201ENST00000455617 1132 ntBASIC23.32■■□□□ 1.32
UBR1Q8IWV7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC23.32■■□□□ 1.32
UBR1Q8IWV7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 RPL7P3-201ENST00000441388 714 ntBASIC23.31■■□□□ 1.32
UBR1Q8IWV7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 GNRHR2-203ENST00000581100 1187 ntBASIC23.31■■□□□ 1.32
UBR1Q8IWV7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 AC009542.2-202ENST00000619004 1067 ntBASIC23.31■■□□□ 1.32
UBR1Q8IWV7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 GPAA1P2-202ENST00000606848 1787 ntBASIC23.31■■□□□ 1.32
UBR1Q8IWV7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC23.31■■□□□ 1.32
UBR1Q8IWV7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AGER-214ENST00000538695 487 ntTSL 2 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AC020765.3-201ENST00000613051 740 ntBASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 CU634019.7-201ENST00000624153 1185 ntBASIC23.3■■□□□ 1.32
UBR1Q8IWV7 FP236241.2-201ENST00000624906 1185 ntBASIC23.3■■□□□ 1.32
UBR1Q8IWV7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AC008764.6-201ENST00000595909 2069 ntBASIC23.3■■□□□ 1.32
UBR1Q8IWV7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 GOLGA2P4-201ENST00000441462 777 ntBASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AC104596.2-201ENST00000512793 793 ntBASIC23.3■■□□□ 1.32
UBR1Q8IWV7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 C2orf69P2-201ENST00000562032 1123 ntBASIC23.3■■□□□ 1.32
UBR1Q8IWV7 AL022328.1-201ENST00000610050 478 ntBASIC23.3■■□□□ 1.32
UBR1Q8IWV7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
UBR1Q8IWV7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 AL031731.1-201ENST00000642131 2094 ntBASIC23.29■■□□□ 1.32
UBR1Q8IWV7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 FTH1P14-201ENST00000482930 551 ntBASIC23.29■■□□□ 1.32
UBR1Q8IWV7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 SLC25A47P1-201ENST00000531577 414 ntBASIC23.29■■□□□ 1.32
UBR1Q8IWV7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC23.29■■□□□ 1.32
UBR1Q8IWV7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms