Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AC073389.1-201ENST00000595595 795 ntBASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 FOXO1B-201ENST00000504678 1527 ntBASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
CCDC60Q8IWA6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 AC080080.1-201ENST00000625121 2420 ntBASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC60Q8IWA6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CCDC60Q8IWA6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC60Q8IWA6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC60Q8IWA6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC60Q8IWA6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC60Q8IWA6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC60Q8IWA6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.52■□□□□ 0.55
CCDC60Q8IWA6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 AC073439.1-201ENST00000624121 1774 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 FAM86GP-201ENST00000448322 971 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 PRYP6-201ENST00000514804 343 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 AC105233.2-201ENST00000523697 349 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 AF228730.5-201ENST00000530288 346 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 ALG1L8P-201ENST00000533887 760 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 AC069262.1-201ENST00000539058 672 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 AC078925.2-201ENST00000624013 1973 ntBASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC60Q8IWA6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms