Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 BX005266.1-201ENST00000473402 457 ntBASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 AC010331.1-201ENST00000611423 582 ntBASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 AC073592.4-201ENST00000623827 446 ntBASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC50Q8IVM0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 KRT16P4-201ENST00000453883 522 ntBASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 AC132008.2-207ENST00000454517 770 ntBASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 AP001269.4-201ENST00000609611 512 ntBASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 AC063926.3-201ENST00000624734 5658 ntBASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC50Q8IVM0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 AP005117.1-201ENST00000584346 1413 ntBASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms