Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 SLC25A1P2-201ENST00000430693 912 ntBASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 AP002490.2-201ENST00000524791 560 ntBASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 AP003041.3-201ENST00000527151 707 ntBASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 AL391256.1-201ENST00000443260 1855 ntBASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CROCCP3Q8IVE0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 AL353719.1-201ENST00000566847 864 ntBASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CROCCP3Q8IVE0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CROCCP3Q8IVE0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms