Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LDB1Q86U70 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.73■□□□□ 0.27
LDB1Q86U70 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB1Q86U70 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
LDB1Q86U70 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB1Q86U70 AC006449.5-201ENST00000610658 2098 ntBASIC16.73■□□□□ 0.27
LDB1Q86U70 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LDB1Q86U70 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
LDB1Q86U70 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.72■□□□□ 0.27
LDB1Q86U70 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.72■□□□□ 0.27
LDB1Q86U70 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.72■□□□□ 0.27
LDB1Q86U70 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
LDB1Q86U70 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
LDB1Q86U70 AC108751.1-201ENST00000490852 363 ntBASIC16.72■□□□□ 0.27
LDB1Q86U70 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 UNC93B6-202ENST00000528242 690 ntBASIC16.72■□□□□ 0.27
LDB1Q86U70 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.72■□□□□ 0.27
LDB1Q86U70 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LDB1Q86U70 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.72■□□□□ 0.27
LDB1Q86U70 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 AL512652.2-201ENST00000625156 1716 ntBASIC16.72■□□□□ 0.27
LDB1Q86U70 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LDB1Q86U70 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LDB1Q86U70 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LDB1Q86U70 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LDB1Q86U70 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LDB1Q86U70 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.72■□□□□ 0.27
LDB1Q86U70 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
LDB1Q86U70 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB1Q86U70 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.71■□□□□ 0.27
LDB1Q86U70 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.71■□□□□ 0.27
LDB1Q86U70 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB1Q86U70 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB1Q86U70 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 MIR4751-201ENST00000578027 74 ntBASIC16.71■□□□□ 0.27
LDB1Q86U70 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB1Q86U70 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB1Q86U70 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.71■□□□□ 0.27
LDB1Q86U70 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
LDB1Q86U70 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LDB1Q86U70 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.7■□□□□ 0.26
LDB1Q86U70 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
LDB1Q86U70 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.7■□□□□ 0.26
LDB1Q86U70 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.7■□□□□ 0.26
LDB1Q86U70 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB1Q86U70 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB1Q86U70 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB1Q86U70 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.7■□□□□ 0.26
LDB1Q86U70 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LDB1Q86U70 AC009947.1-201ENST00000444350 727 ntBASIC16.7■□□□□ 0.26
LDB1Q86U70 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB1Q86U70 AC079776.4-201ENST00000511039 504 ntBASIC16.7■□□□□ 0.26
LDB1Q86U70 RNA5SP415-201ENST00000517246 115 ntBASIC16.7■□□□□ 0.26
LDB1Q86U70 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.7■□□□□ 0.26
LDB1Q86U70 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.7■□□□□ 0.26
LDB1Q86U70 CYP2A7P1-201ENST00000595391 815 ntBASIC16.7■□□□□ 0.26
LDB1Q86U70 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB1Q86U70 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms