Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 AL353135.1-201ENST00000606729 504 ntBASIC16.49■□□□□ 0.23
SYVN1Q86TM6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYVN1Q86TM6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AC073621.1-201ENST00000392730 636 ntBASIC16.48■□□□□ 0.23
SYVN1Q86TM6 YBX2P1-201ENST00000394192 760 ntBASIC16.48■□□□□ 0.23
SYVN1Q86TM6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AC007967.2-201ENST00000432613 625 ntBASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AC002347.1-201ENST00000569543 541 ntBASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AL691403.2-201ENST00000618460 490 ntBASIC16.48■□□□□ 0.23
SYVN1Q86TM6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 ALOX12P2-203ENST00000570921 1945 ntBASIC16.48■□□□□ 0.23
SYVN1Q86TM6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AL021920.2-201ENST00000624828 1351 ntBASIC16.48■□□□□ 0.23
SYVN1Q86TM6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.48■□□□□ 0.23
SYVN1Q86TM6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 AC092364.2-201ENST00000596710 2692 ntBASIC16.47■□□□□ 0.23
SYVN1Q86TM6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 AC004832.2-201ENST00000426397 482 ntBASIC16.47■□□□□ 0.23
SYVN1Q86TM6 GPX1P2-201ENST00000429271 606 ntBASIC16.47■□□□□ 0.23
SYVN1Q86TM6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 AC108751.1-201ENST00000490852 363 ntBASIC16.47■□□□□ 0.23
SYVN1Q86TM6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 AC010327.4-202ENST00000591484 748 ntBASIC16.47■□□□□ 0.23
SYVN1Q86TM6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 LINC00895-201ENST00000629028 1637 ntBASIC16.47■□□□□ 0.23
SYVN1Q86TM6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYVN1Q86TM6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms