Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC149Q6ZUS6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC149Q6ZUS6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC149Q6ZUS6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCDC149Q6ZUS6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC149Q6ZUS6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC149Q6ZUS6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCDC149Q6ZUS6 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.52■□□□□ 0.39
CCDC149Q6ZUS6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 MRPS18AP1-201ENST00000414458 589 ntBASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 AC007274.1-201ENST00000439805 662 ntBASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 PRYP6-201ENST00000514804 343 ntBASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 AL596325.1-201ENST00000563991 1082 ntBASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 AL590560.3-201ENST00000623350 461 ntBASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC149Q6ZUS6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 AP3S2-216ENST00000617003 1561 ntBASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 LTB4R2-202ENST00000528054 3092 ntBASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 AL359881.2-201ENST00000602973 570 ntBASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 AC003101.2-201ENST00000612557 442 ntBASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC149Q6ZUS6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 AC022144.1-201ENST00000602255 1580 ntBASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 HLA-H-201ENST00000383620 1096 ntBASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 NME2P1-201ENST00000426182 414 ntBASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 MEIS3P1-201ENST00000495167 958 ntBASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC149Q6ZUS6 AC013467.2-201ENST00000605472 835 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms