Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 ME2P1-201ENST00000426028 1970 ntBASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 DOC2GP-204ENST00000639052 2548 ntBASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 CYP2A7P1-201ENST00000595391 815 ntBASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 AL773604.1-201ENST00000617417 272 ntBASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 AC004790.2-201ENST00000623588 572 ntBASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 AC005593.1-201ENST00000624894 515 ntBASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 AC129492.6-201ENST00000611383 1305 ntBASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 KRT8P39-201ENST00000396270 1433 ntBASIC16.62■□□□□ 0.25
ZNF549Q6P9A3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 AL353732.1-201ENST00000569618 1459 ntBASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 RPS2P28-201ENST00000314255 741 ntBASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 AL031284.1-201ENST00000419297 478 ntBASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 AC092910.1-201ENST00000482027 1129 ntBASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 GGT3P-204ENST00000453783 1664 ntBASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 GGT4P-201ENST00000623672 1708 ntBASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF549Q6P9A3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 FER1L4-210ENST00000615531 5998 ntBASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 AL031731.1-201ENST00000642131 2094 ntBASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF549Q6P9A3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms