Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 ALOX12P2-203ENST00000570921 1945 ntBASIC15.28■□□□□ 0.04
NIPAL3Q6P499 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 LAGE3P1-201ENST00000425356 484 ntBASIC15.28■□□□□ 0.04
NIPAL3Q6P499 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 AP002469.2-201ENST00000531724 424 ntBASIC15.28■□□□□ 0.04
NIPAL3Q6P499 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 DUX4L17-201ENST00000557360 1267 ntBASIC15.28■□□□□ 0.04
NIPAL3Q6P499 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 AC006557.2-201ENST00000592985 1240 ntBASIC15.28■□□□□ 0.04
NIPAL3Q6P499 AL139424.1-201ENST00000607572 797 ntBASIC15.28■□□□□ 0.04
NIPAL3Q6P499 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 AC107918.4-202ENST00000641623 219 ntBASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.28■□□□□ 0.04
NIPAL3Q6P499 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NIPAL3Q6P499 AC104692.2-201ENST00000603054 253 ntBASIC15.27■□□□□ 0.04
NIPAL3Q6P499 AC004706.3-202ENST00000621574 984 ntBASIC15.27■□□□□ 0.04
NIPAL3Q6P499 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 AC007950.2-201ENST00000615045 2347 ntBASIC15.27■□□□□ 0.03
NIPAL3Q6P499 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
NIPAL3Q6P499 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NIPAL3Q6P499 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms