Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 AL138688.1-201ENST00000624851 1594 ntBASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
LYSMD4Q5XG99 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AC132938.2-201ENST00000579188 680 ntBASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AC007431.3-201ENST00000623221 587 ntBASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 AL591163.1-201ENST00000641757 987 ntBASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
LYSMD4Q5XG99 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 ACA64.2-201ENST00000459014 129 ntBASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 AL512361.1-201ENST00000554200 418 ntBASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 AC044860.1-202ENST00000559481 777 ntBASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 WASH4P-201ENST00000564273 1246 ntBASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 CHCHD2P3-201ENST00000603038 451 ntBASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 MIR6805-201ENST00000615055 62 ntBASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 MIR6799-201ENST00000620297 69 ntBASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD4Q5XG99 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 AC135050.7-201ENST00000624508 2218 ntBASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms