Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 AL031055.1-201ENST00000606362 631 ntBASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 FAM197Y3-203ENST00000618346 717 ntBASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 AC007064.4-201ENST00000637740 555 ntBASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PTPN20Q4JDL3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 GPAA1P2-202ENST00000606848 1787 ntBASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN20Q4JDL3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 AL591424.1-201ENST00000442569 1213 ntBASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 AL513190.1-201ENST00000621254 727 ntBASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 ME2P1-201ENST00000426028 1970 ntBASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN20Q4JDL3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 AC092364.2-201ENST00000596710 2692 ntBASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 AP000347.1-202ENST00000435868 847 ntBASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 RNA5SP416-201ENST00000516838 111 ntBASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 AC092865.6-201ENST00000642101 219 ntBASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN20Q4JDL3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN20Q4JDL3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms