Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX7Q2KHR2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 FAM8A3P-201ENST00000427218 844 ntBASIC20.11■□□□□ 0.81
RFX7Q2KHR2 AL592309.1-201ENST00000443127 649 ntBASIC20.11■□□□□ 0.81
RFX7Q2KHR2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 AL512356.2-201ENST00000546955 174 ntBASIC20.11■□□□□ 0.81
RFX7Q2KHR2 AC004449.1-201ENST00000564240 433 ntBASIC20.11■□□□□ 0.81
RFX7Q2KHR2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 AP001059.3-201ENST00000619053 235 ntBASIC20.11■□□□□ 0.81
RFX7Q2KHR2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX7Q2KHR2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.11■□□□□ 0.81
RFX7Q2KHR2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 AC025678.2-201ENST00000562061 970 ntBASIC20.1■□□□□ 0.81
RFX7Q2KHR2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 AC011467.4-201ENST00000594891 528 ntBASIC20.1■□□□□ 0.81
RFX7Q2KHR2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 AL161645.1-201ENST00000622716 1255 ntBASIC20.1■□□□□ 0.81
RFX7Q2KHR2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.1■□□□□ 0.81
RFX7Q2KHR2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 AC092474.2-201ENST00000424288 719 ntBASIC20.09■□□□□ 0.81
RFX7Q2KHR2 SPDYE14P-201ENST00000442619 822 ntBASIC20.09■□□□□ 0.81
RFX7Q2KHR2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms