Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 AL031731.1-201ENST00000642131 2094 ntBASIC19.45■□□□□ 0.7
RTN1Q16799 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN1Q16799 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RTN1Q16799 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN1Q16799 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN1Q16799 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN1Q16799 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.45■□□□□ 0.7
RTN1Q16799 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.45■□□□□ 0.7
RTN1Q16799 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.45■□□□□ 0.7
RTN1Q16799 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.45■□□□□ 0.7
RTN1Q16799 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN1Q16799 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN1Q16799 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.45■□□□□ 0.7
RTN1Q16799 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN1Q16799 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN1Q16799 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN1Q16799 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 AC092919.2-201ENST00000623631 1645 ntBASIC19.44■□□□□ 0.7
RTN1Q16799 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
RTN1Q16799 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 AC074386.1-202ENST00000463561 864 ntBASIC19.44■□□□□ 0.7
RTN1Q16799 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.44■□□□□ 0.7
RTN1Q16799 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTN1Q16799 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 GGT4P-201ENST00000623672 1708 ntBASIC19.44■□□□□ 0.7
RTN1Q16799 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.44■□□□□ 0.7
RTN1Q16799 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTN1Q16799 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTN1Q16799 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN1Q16799 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
RTN1Q16799 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RTN1Q16799 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN1Q16799 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN1Q16799 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN1Q16799 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.43■□□□□ 0.7
RTN1Q16799 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN1Q16799 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN1Q16799 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.43■□□□□ 0.7
RTN1Q16799 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.43■□□□□ 0.7
RTN1Q16799 AC040169.1-201ENST00000565382 521 ntBASIC19.43■□□□□ 0.7
RTN1Q16799 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.43■□□□□ 0.7
RTN1Q16799 MIR3909-201ENST00000579518 119 ntBASIC19.43■□□□□ 0.7
RTN1Q16799 AC068137.2-201ENST00000605408 478 ntBASIC19.43■□□□□ 0.7
RTN1Q16799 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN1Q16799 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
RTN1Q16799 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN1Q16799 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN1Q16799 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN1Q16799 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN1Q16799 GGT3P-204ENST00000453783 1664 ntBASIC19.43■□□□□ 0.7
RTN1Q16799 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN1Q16799 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RTN1Q16799 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RTN1Q16799 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms