Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 AC022144.1-201ENST00000602255 1580 ntBASIC17.65■□□□□ 0.42
DSC1Q08554 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DSC1Q08554 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DSC1Q08554 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DSC1Q08554 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DSC1Q08554 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DSC1Q08554 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DSC1Q08554 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
DSC1Q08554 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
DSC1Q08554 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.64■□□□□ 0.41
DSC1Q08554 GGT4P-201ENST00000623672 1708 ntBASIC17.64■□□□□ 0.41
DSC1Q08554 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DSC1Q08554 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DSC1Q08554 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DSC1Q08554 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.64■□□□□ 0.41
DSC1Q08554 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.64■□□□□ 0.41
DSC1Q08554 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.64■□□□□ 0.41
DSC1Q08554 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.64■□□□□ 0.41
DSC1Q08554 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
DSC1Q08554 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.64■□□□□ 0.41
DSC1Q08554 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.64■□□□□ 0.41
DSC1Q08554 SERBP1P5-201ENST00000510079 1181 ntBASIC17.64■□□□□ 0.41
DSC1Q08554 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.64■□□□□ 0.41
DSC1Q08554 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.64■□□□□ 0.41
DSC1Q08554 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.64■□□□□ 0.41
DSC1Q08554 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.64■□□□□ 0.41
DSC1Q08554 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.64■□□□□ 0.41
DSC1Q08554 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.64■□□□□ 0.41
DSC1Q08554 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DSC1Q08554 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.64■□□□□ 0.41
DSC1Q08554 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
DSC1Q08554 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
DSC1Q08554 RPL37AP1-201ENST00000412502 279 ntBASIC17.63■□□□□ 0.41
DSC1Q08554 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DSC1Q08554 CETN4P-206ENST00000642099 2168 ntBASIC17.63■□□□□ 0.41
DSC1Q08554 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.63■□□□□ 0.41
DSC1Q08554 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
DSC1Q08554 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.62■□□□□ 0.41
DSC1Q08554 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
DSC1Q08554 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
DSC1Q08554 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.62■□□□□ 0.41
DSC1Q08554 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.62■□□□□ 0.41
DSC1Q08554 AL844908.2-201ENST00000609461 460 ntBASIC17.62■□□□□ 0.41
DSC1Q08554 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.62■□□□□ 0.41
DSC1Q08554 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DSC1Q08554 AC087499.5-201ENST00000452760 1342 ntBASIC17.62■□□□□ 0.41
DSC1Q08554 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms