Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK3Q00526 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK3Q00526 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK3Q00526 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK3Q00526 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK3Q00526 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK3Q00526 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.42■□□□□ 0.22
CDK3Q00526 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.42■□□□□ 0.22
CDK3Q00526 AL512652.2-201ENST00000625156 1716 ntBASIC16.42■□□□□ 0.22
CDK3Q00526 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDK3Q00526 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
CDK3Q00526 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK3Q00526 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK3Q00526 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CDK3Q00526 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CDK3Q00526 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK3Q00526 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 UXT-AS1-201ENST00000590504 1525 ntBASIC16.41■□□□□ 0.22
CDK3Q00526 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CDK3Q00526 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK3Q00526 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK3Q00526 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CDK3Q00526 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.41■□□□□ 0.22
CDK3Q00526 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK3Q00526 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.41■□□□□ 0.22
CDK3Q00526 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.41■□□□□ 0.22
CDK3Q00526 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.41■□□□□ 0.22
CDK3Q00526 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK3Q00526 AC027307.2-201ENST00000591252 911 ntBASIC16.41■□□□□ 0.22
CDK3Q00526 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.41■□□□□ 0.22
CDK3Q00526 LINC00628-201ENST00000628516 1289 ntBASIC16.41■□□□□ 0.22
CDK3Q00526 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK3Q00526 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDK3Q00526 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDK3Q00526 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK3Q00526 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDK3Q00526 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CDK3Q00526 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
CDK3Q00526 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK3Q00526 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CDK3Q00526 AC026471.1-201ENST00000564629 3026 ntBASIC16.4■□□□□ 0.22
CDK3Q00526 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDK3Q00526 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 FAM58DP-201ENST00000428076 619 ntBASIC16.4■□□□□ 0.22
CDK3Q00526 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.4■□□□□ 0.22
CDK3Q00526 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.4■□□□□ 0.22
CDK3Q00526 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK3Q00526 AC093028.1-201ENST00000622998 982 ntBASIC16.4■□□□□ 0.22
CDK3Q00526 AC084121.4-201ENST00000641598 221 ntBASIC16.4■□□□□ 0.22
CDK3Q00526 AF228730.8-201ENST00000642140 221 ntBASIC16.4■□□□□ 0.22
CDK3Q00526 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK3Q00526 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK3Q00526 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDK3Q00526 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK3Q00526 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK3Q00526 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK3Q00526 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK3Q00526 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDK3Q00526 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK3Q00526 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDK3Q00526 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDK3Q00526 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.39■□□□□ 0.21
CDK3Q00526 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDK3Q00526 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms