Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX6-1P78426 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX6-1P78426 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NKX6-1P78426 BCAR1-209ENST00000546196 1340 ntBASIC14.81□□□□□ -0.04
NKX6-1P78426 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX6-1P78426 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NKX6-1P78426 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NKX6-1P78426 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 AC068418.2-201ENST00000577309 3703 ntBASIC14.8□□□□□ -0.04
NKX6-1P78426 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NKX6-1P78426 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 MRPL20P1-201ENST00000400819 433 ntBASIC14.8□□□□□ -0.04
NKX6-1P78426 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.8□□□□□ -0.04
NKX6-1P78426 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.8□□□□□ -0.04
NKX6-1P78426 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.8□□□□□ -0.04
NKX6-1P78426 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NKX6-1P78426 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.8□□□□□ -0.04
NKX6-1P78426 AL096865.1-201ENST00000606796 927 ntBASIC14.8□□□□□ -0.04
NKX6-1P78426 AC010654.1-201ENST00000615722 808 ntBASIC14.8□□□□□ -0.04
NKX6-1P78426 GGTLC5P-201ENST00000617623 998 ntBASIC14.8□□□□□ -0.04
NKX6-1P78426 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.8□□□□□ -0.04
NKX6-1P78426 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.8□□□□□ -0.04
NKX6-1P78426 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NKX6-1P78426 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NKX6-1P78426 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-1P78426 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-1P78426 AD000864.1-201ENST00000624076 2295 ntBASIC14.8□□□□□ -0.04
NKX6-1P78426 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 CICP6-201ENST00000457191 2729 ntBASIC14.79□□□□□ -0.04
NKX6-1P78426 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-1P78426 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-1P78426 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-1P78426 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-1P78426 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX6-1P78426 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-1P78426 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.79□□□□□ -0.04
NKX6-1P78426 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX6-1P78426 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX6-1P78426 FAM58CP-201ENST00000435741 640 ntBASIC14.79□□□□□ -0.04
NKX6-1P78426 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms