Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.12■□□□□ 0.01
RPS4XP62701 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.12■□□□□ 0.01
RPS4XP62701 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.12■□□□□ 0.01
RPS4XP62701 AC107918.2-201ENST00000530817 355 ntBASIC15.12■□□□□ 0.01
RPS4XP62701 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.12■□□□□ 0.01
RPS4XP62701 AC034105.1-201ENST00000563488 319 ntBASIC15.12■□□□□ 0.01
RPS4XP62701 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.12■□□□□ 0.01
RPS4XP62701 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.12■□□□□ 0.01
RPS4XP62701 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.12■□□□□ 0.01
RPS4XP62701 MIR1199-201ENST00000621445 119 ntBASIC15.12■□□□□ 0.01
RPS4XP62701 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.12■□□□□ 0.01
RPS4XP62701 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RPS4XP62701 AC092364.2-201ENST00000596710 2692 ntBASIC15.12■□□□□ 0.01
RPS4XP62701 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RPS4XP62701 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.12■□□□□ 0.01
RPS4XP62701 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
RPS4XP62701 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RPS4XP62701 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPS4XP62701 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.11■□□□□ 0.01
RPS4XP62701 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.11■□□□□ 0.01
RPS4XP62701 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 PCDH8P1-201ENST00000428983 2773 ntBASIC15.11■□□□□ 0.01
RPS4XP62701 AL513523.2-202ENST00000427283 2040 ntBASIC15.11■□□□□ 0.01
RPS4XP62701 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 AC073621.1-201ENST00000392730 636 ntBASIC15.11■□□□□ 0.01
RPS4XP62701 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.11■□□□□ 0.01
RPS4XP62701 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 KRT18P3-201ENST00000451602 1288 ntBASIC15.11■□□□□ 0.01
RPS4XP62701 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
RPS4XP62701 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.11■□□□□ 0.01
RPS4XP62701 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.11■□□□□ 0.01
RPS4XP62701 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.11■□□□□ 0.01
RPS4XP62701 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.11■□□□□ 0.01
RPS4XP62701 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.11■□□□□ 0.01
RPS4XP62701 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.11■□□□□ 0.01
RPS4XP62701 SLC22A20-204ENST00000530038 1673 ntBASIC15.11■□□□□ 0.01
RPS4XP62701 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RPS4XP62701 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 AL671710.1-201ENST00000610245 2349 ntBASIC15.11■□□□□ 0.01
RPS4XP62701 AC131009.4-201ENST00000624048 1740 ntBASIC15.11■□□□□ 0.01
RPS4XP62701 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
RPS4XP62701 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.11■□□□□ 0.01
RPS4XP62701 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.11■□□□□ 0.01
RPS4XP62701 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RPS4XP62701 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPS4XP62701 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms