Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MCCD1P59942 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 AC006449.6-201ENST00000612330 2296 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 PMS2P7-201ENST00000506558 1336 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 MIR346-201ENST00000362234 95 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 AC023274.1-201ENST00000418278 595 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 ACTG1P14-201ENST00000446382 1122 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 RARRES2P8-201ENST00000566335 367 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.82■□□□□ 0.44
MCCD1P59942 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 AC002347.1-201ENST00000569543 541 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.82■□□□□ 0.44
MCCD1P59942 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.82■□□□□ 0.44
MCCD1P59942 AC091812.2-201ENST00000619081 385 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 C20orf181-201ENST00000623918 480 ntBASIC17.82■□□□□ 0.44
MCCD1P59942 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MCCD1P59942 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.82■□□□□ 0.44
MCCD1P59942 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MCCD1P59942 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.81■□□□□ 0.44
MCCD1P59942 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MCCD1P59942 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.81■□□□□ 0.44
MCCD1P59942 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 AL513523.2-202ENST00000427283 2040 ntBASIC17.81■□□□□ 0.44
MCCD1P59942 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 AL596087.1-201ENST00000400979 1969 ntBASIC17.81■□□□□ 0.44
MCCD1P59942 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.81■□□□□ 0.44
MCCD1P59942 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.81■□□□□ 0.44
MCCD1P59942 AL355306.1-201ENST00000415580 579 ntBASIC17.81■□□□□ 0.44
MCCD1P59942 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.81■□□□□ 0.44
MCCD1P59942 YBX1P5-201ENST00000509441 847 ntBASIC17.81■□□□□ 0.44
MCCD1P59942 POLD2P1-201ENST00000511220 997 ntBASIC17.81■□□□□ 0.44
MCCD1P59942 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
MCCD1P59942 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MCCD1P59942 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MCCD1P59942 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MCCD1P59942 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MCCD1P59942 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MCCD1P59942 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MCCD1P59942 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MCCD1P59942 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MCCD1P59942 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.8■□□□□ 0.44
MCCD1P59942 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MCCD1P59942 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MCCD1P59942 U82695.1-201ENST00000635752 1889 ntBASIC17.8■□□□□ 0.44
MCCD1P59942 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
MCCD1P59942 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MCCD1P59942 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MCCD1P59942 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.8■□□□□ 0.44
MCCD1P59942 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.8■□□□□ 0.44
MCCD1P59942 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MCCD1P59942 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MCCD1P59942 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MCCD1P59942 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.8■□□□□ 0.44
MCCD1P59942 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms