Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.45□□□□□ -0.42
CMC4P56277 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 AC006538.1-201ENST00000567905 1585 ntBASIC12.45□□□□□ -0.42
CMC4P56277 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 RNU1-129P-201ENST00000384064 167 ntBASIC12.45□□□□□ -0.42
CMC4P56277 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 BX842568.4-201ENST00000421222 227 ntBASIC12.45□□□□□ -0.42
CMC4P56277 AC092474.2-201ENST00000424288 719 ntBASIC12.45□□□□□ -0.42
CMC4P56277 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.45□□□□□ -0.42
CMC4P56277 KRT18P34-201ENST00000488218 1270 ntBASIC12.45□□□□□ -0.42
CMC4P56277 PGAM5P1-201ENST00000518923 814 ntBASIC12.45□□□□□ -0.42
CMC4P56277 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 U1.21-201ENST00000580816 167 ntBASIC12.45□□□□□ -0.42
CMC4P56277 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.45□□□□□ -0.42
CMC4P56277 AL009183.1-201ENST00000603760 355 ntBASIC12.45□□□□□ -0.42
CMC4P56277 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CMC4P56277 AC079781.4-201ENST00000641908 219 ntBASIC12.45□□□□□ -0.42
CMC4P56277 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CMC4P56277 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CMC4P56277 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.45□□□□□ -0.42
CMC4P56277 SLC22A20-204ENST00000530038 1673 ntBASIC12.45□□□□□ -0.42
CMC4P56277 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 AKAP8P1-201ENST00000434743 1349 ntBASIC12.44□□□□□ -0.42
CMC4P56277 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 AC023274.1-201ENST00000418278 595 ntBASIC12.44□□□□□ -0.42
CMC4P56277 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.44□□□□□ -0.42
CMC4P56277 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.44□□□□□ -0.42
CMC4P56277 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.44□□□□□ -0.42
CMC4P56277 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.44□□□□□ -0.42
CMC4P56277 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CMC4P56277 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMC4P56277 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms