Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PAX9P55771 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PAX9P55771 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 AC005521.1-201ENST00000393351 872 ntBASIC13.47□□□□□ -0.25
PAX9P55771 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.47□□□□□ -0.25
PAX9P55771 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 AC211429.1-201ENST00000415277 523 ntBASIC13.47□□□□□ -0.25
PAX9P55771 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 AC117947.1-201ENST00000427448 529 ntBASIC13.47□□□□□ -0.25
PAX9P55771 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.47□□□□□ -0.25
PAX9P55771 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.47□□□□□ -0.25
PAX9P55771 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.47□□□□□ -0.25
PAX9P55771 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.47□□□□□ -0.25
PAX9P55771 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PAX9P55771 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
PAX9P55771 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PAX9P55771 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PAX9P55771 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.47□□□□□ -0.25
PAX9P55771 AC097637.2-201ENST00000624096 1997 ntBASIC13.47□□□□□ -0.25
PAX9P55771 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 TNRC18P2-201ENST00000417666 2714 ntBASIC13.47□□□□□ -0.25
PAX9P55771 AC006058.4-201ENST00000624016 1670 ntBASIC13.47□□□□□ -0.25
PAX9P55771 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.47□□□□□ -0.25
PAX9P55771 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
PAX9P55771 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PAX9P55771 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 LINC02228-204ENST00000642115 2962 ntBASIC13.46□□□□□ -0.25
PAX9P55771 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.46□□□□□ -0.25
PAX9P55771 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.46□□□□□ -0.25
PAX9P55771 HOMER2P1-201ENST00000455653 964 ntBASIC13.46□□□□□ -0.25
PAX9P55771 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.46□□□□□ -0.25
PAX9P55771 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.46□□□□□ -0.25
PAX9P55771 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX9P55771 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
PAX9P55771 LINC02447-202ENST00000501888 2146 ntBASIC13.46□□□□□ -0.26
PAX9P55771 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX9P55771 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
PAX9P55771 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX9P55771 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX9P55771 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PAX9P55771 REXO1L8P-201ENST00000604378 1897 ntBASIC13.46□□□□□ -0.26
PAX9P55771 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
PAX9P55771 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PAX9P55771 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX9P55771 AL031731.1-201ENST00000642131 2094 ntBASIC13.46□□□□□ -0.26
PAX9P55771 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PAX9P55771 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
PAX9P55771 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.46□□□□□ -0.26
PAX9P55771 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PAX9P55771 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.45□□□□□ -0.26
PAX9P55771 PMPCAP1-201ENST00000508114 1576 ntBASIC13.45□□□□□ -0.26
PAX9P55771 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX9P55771 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PAX9P55771 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.45□□□□□ -0.26
PAX9P55771 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX9P55771 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PAX9P55771 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms