Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 CYP2T1P-201ENST00000432607 1285 ntBASIC14.26□□□□□ -0.13
NKX2-5P52952 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX2-5P52952 C1QL1P1-201ENST00000568105 661 ntBASIC14.26□□□□□ -0.13
NKX2-5P52952 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-5P52952 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 AC016027.1-202ENST00000607927 1699 ntBASIC14.26□□□□□ -0.13
NKX2-5P52952 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX2-5P52952 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-5P52952 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
NKX2-5P52952 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-5P52952 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-5P52952 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
NKX2-5P52952 AL023284.2-201ENST00000405850 579 ntBASIC14.25□□□□□ -0.13
NKX2-5P52952 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.25□□□□□ -0.13
NKX2-5P52952 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.25□□□□□ -0.13
NKX2-5P52952 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
NKX2-5P52952 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-5P52952 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 AC036111.1-201ENST00000533973 1582 ntBASIC14.25□□□□□ -0.13
NKX2-5P52952 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NKX2-5P52952 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NKX2-5P52952 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-5P52952 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-5P52952 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-5P52952 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX2-5P52952 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX2-5P52952 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NKX2-5P52952 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX2-5P52952 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 AC027612.1-201ENST00000445234 2395 ntBASIC14.24□□□□□ -0.13
NKX2-5P52952 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-5P52952 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-5P52952 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-5P52952 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NKX2-5P52952 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 LSM12P1-201ENST00000411836 588 ntBASIC14.24□□□□□ -0.13
NKX2-5P52952 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.24□□□□□ -0.13
NKX2-5P52952 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.24□□□□□ -0.13
NKX2-5P52952 KRT18P61-201ENST00000585825 1298 ntBASIC14.24□□□□□ -0.13
NKX2-5P52952 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-5P52952 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms