Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
USP11P51784 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
USP11P51784 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.86■□□□□ 0.61
USP11P51784 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.86■□□□□ 0.61
USP11P51784 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.86■□□□□ 0.61
USP11P51784 AC016027.1-202ENST00000607927 1699 ntBASIC18.86■□□□□ 0.61
USP11P51784 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
USP11P51784 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
USP11P51784 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
USP11P51784 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
USP11P51784 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
USP11P51784 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
USP11P51784 AP006288.1-201ENST00000446065 395 ntBASIC18.86■□□□□ 0.61
USP11P51784 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.86■□□□□ 0.61
USP11P51784 KRT18P34-201ENST00000488218 1270 ntBASIC18.86■□□□□ 0.61
USP11P51784 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.86■□□□□ 0.61
USP11P51784 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.86■□□□□ 0.61
USP11P51784 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.86■□□□□ 0.61
USP11P51784 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.86■□□□□ 0.61
USP11P51784 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
USP11P51784 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.86■□□□□ 0.61
USP11P51784 AC105339.1-204ENST00000636249 355 ntBASIC18.86■□□□□ 0.61
USP11P51784 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.86■□□□□ 0.61
USP11P51784 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.86■□□□□ 0.61
USP11P51784 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
USP11P51784 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 AC011676.5-201ENST00000624864 2660 ntBASIC18.86■□□□□ 0.61
USP11P51784 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.86■□□□□ 0.61
USP11P51784 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP11P51784 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.85■□□□□ 0.61
USP11P51784 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USP11P51784 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.85■□□□□ 0.61
USP11P51784 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USP11P51784 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.85■□□□□ 0.61
USP11P51784 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.85■□□□□ 0.61
USP11P51784 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 RN7SL589P-201ENST00000481268 310 ntBASIC18.85■□□□□ 0.61
USP11P51784 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
USP11P51784 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.85■□□□□ 0.61
USP11P51784 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 AC243562.1-201ENST00000560672 389 ntBASIC18.85■□□□□ 0.61
USP11P51784 AL135744.1-201ENST00000565098 629 ntBASIC18.85■□□□□ 0.61
USP11P51784 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.85■□□□□ 0.61
USP11P51784 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.85■□□□□ 0.61
USP11P51784 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 AC134684.3-201ENST00000641758 218 ntBASIC18.85■□□□□ 0.61
USP11P51784 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
USP11P51784 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.85■□□□□ 0.61
USP11P51784 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
USP11P51784 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP11P51784 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
USP11P51784 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms