Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.82■□□□□ 0.12
KNTC1P50748 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
KNTC1P50748 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
KNTC1P50748 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.82■□□□□ 0.12
KNTC1P50748 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.82■□□□□ 0.12
KNTC1P50748 CETN4P-206ENST00000642099 2168 ntBASIC15.82■□□□□ 0.12
KNTC1P50748 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
KNTC1P50748 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.82■□□□□ 0.12
KNTC1P50748 AC133963.1-201ENST00000504166 1679 ntBASIC15.82■□□□□ 0.12
KNTC1P50748 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.82■□□□□ 0.12
KNTC1P50748 AC098859.1-201ENST00000502915 1238 ntBASIC15.82■□□□□ 0.12
KNTC1P50748 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.82■□□□□ 0.12
KNTC1P50748 AC008494.3-201ENST00000606615 944 ntBASIC15.82■□□□□ 0.12
KNTC1P50748 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KNTC1P50748 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
KNTC1P50748 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.81■□□□□ 0.12
KNTC1P50748 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.81■□□□□ 0.12
KNTC1P50748 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
KNTC1P50748 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.81■□□□□ 0.12
KNTC1P50748 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 AC119751.2-201ENST00000504529 210 ntBASIC15.81■□□□□ 0.12
KNTC1P50748 AC092658.1-201ENST00000505836 891 ntBASIC15.81■□□□□ 0.12
KNTC1P50748 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.81■□□□□ 0.12
KNTC1P50748 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.81■□□□□ 0.12
KNTC1P50748 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.81■□□□□ 0.12
KNTC1P50748 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.81■□□□□ 0.12
KNTC1P50748 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.81■□□□□ 0.12
KNTC1P50748 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.81■□□□□ 0.12
KNTC1P50748 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.81■□□□□ 0.12
KNTC1P50748 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
KNTC1P50748 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KNTC1P50748 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 GNAQP1-201ENST00000444815 1067 ntBASIC15.8■□□□□ 0.12
KNTC1P50748 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.8■□□□□ 0.12
KNTC1P50748 PRYP6-201ENST00000514804 343 ntBASIC15.8■□□□□ 0.12
KNTC1P50748 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.8■□□□□ 0.12
KNTC1P50748 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.8■□□□□ 0.12
KNTC1P50748 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.8■□□□□ 0.12
KNTC1P50748 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.8■□□□□ 0.12
KNTC1P50748 AL589739.1-201ENST00000607720 493 ntBASIC15.8■□□□□ 0.12
KNTC1P50748 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
KNTC1P50748 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.8■□□□□ 0.12
KNTC1P50748 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.8■□□□□ 0.12
KNTC1P50748 KRT8P12-202ENST00000472924 1397 ntBASIC15.8■□□□□ 0.12
KNTC1P50748 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KNTC1P50748 EGFEM1P-202ENST00000431685 1563 ntBASIC15.8■□□□□ 0.12
KNTC1P50748 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.8■□□□□ 0.12
KNTC1P50748 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.8■□□□□ 0.12
KNTC1P50748 AC044860.1-202ENST00000559481 777 ntBASIC15.8■□□□□ 0.12
KNTC1P50748 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.8■□□□□ 0.12
KNTC1P50748 AL133215.2-201ENST00000609242 977 ntBASIC15.8■□□□□ 0.12
KNTC1P50748 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.8■□□□□ 0.12
KNTC1P50748 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
KNTC1P50748 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.8■□□□□ 0.12
KNTC1P50748 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.8■□□□□ 0.12
KNTC1P50748 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.8■□□□□ 0.12
KNTC1P50748 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KNTC1P50748 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.79■□□□□ 0.12
KNTC1P50748 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KNTC1P50748 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms