Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 AC142381.1-201ENST00000426099 345 ntBASIC18.86■□□□□ 0.61
CLK2P49760 GPS2P2-201ENST00000430745 888 ntBASIC18.86■□□□□ 0.61
CLK2P49760 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.86■□□□□ 0.61
CLK2P49760 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.86■□□□□ 0.61
CLK2P49760 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLK2P49760 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLK2P49760 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CLK2P49760 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.86■□□□□ 0.61
CLK2P49760 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLK2P49760 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLK2P49760 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.85■□□□□ 0.61
CLK2P49760 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.85■□□□□ 0.61
CLK2P49760 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.85■□□□□ 0.61
CLK2P49760 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.85■□□□□ 0.61
CLK2P49760 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.85■□□□□ 0.61
CLK2P49760 AC093724.1-201ENST00000448659 1027 ntBASIC18.85■□□□□ 0.61
CLK2P49760 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 AC092183.1-201ENST00000469884 875 ntBASIC18.85■□□□□ 0.61
CLK2P49760 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 AC009093.7-201ENST00000623853 1223 ntBASIC18.85■□□□□ 0.61
CLK2P49760 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CLK2P49760 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.85■□□□□ 0.61
CLK2P49760 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLK2P49760 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLK2P49760 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.85■□□□□ 0.61
CLK2P49760 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK2P49760 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK2P49760 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLK2P49760 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK2P49760 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK2P49760 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK2P49760 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.84■□□□□ 0.61
CLK2P49760 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 AL139400.1-201ENST00000366220 510 ntBASIC18.84■□□□□ 0.61
CLK2P49760 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK2P49760 AC023141.5-201ENST00000458585 616 ntBASIC18.84■□□□□ 0.61
CLK2P49760 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK2P49760 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK2P49760 PRYP6-201ENST00000514804 343 ntBASIC18.84■□□□□ 0.61
CLK2P49760 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CLK2P49760 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK2P49760 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.84■□□□□ 0.61
CLK2P49760 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK2P49760 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.84■□□□□ 0.61
CLK2P49760 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.84■□□□□ 0.61
CLK2P49760 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLK2P49760 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLK2P49760 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.84■□□□□ 0.61
CLK2P49760 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLK2P49760 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.83■□□□□ 0.61
CLK2P49760 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms