Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.82■□□□□ 0.12
CLK1P49759 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.82■□□□□ 0.12
CLK1P49759 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK1P49759 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.82■□□□□ 0.12
CLK1P49759 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK1P49759 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.82■□□□□ 0.12
CLK1P49759 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLK1P49759 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK1P49759 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK1P49759 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.82■□□□□ 0.12
CLK1P49759 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK1P49759 AC105917.1-201ENST00000506637 2539 ntBASIC15.82■□□□□ 0.12
CLK1P49759 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLK1P49759 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
CLK1P49759 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLK1P49759 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
CLK1P49759 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLK1P49759 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.81■□□□□ 0.12
CLK1P49759 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.81■□□□□ 0.12
CLK1P49759 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.81■□□□□ 0.12
CLK1P49759 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.81■□□□□ 0.12
CLK1P49759 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.81■□□□□ 0.12
CLK1P49759 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.81■□□□□ 0.12
CLK1P49759 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.81■□□□□ 0.12
CLK1P49759 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CLK1P49759 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.81■□□□□ 0.12
CLK1P49759 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
CLK1P49759 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 AC116353.5-201ENST00000638148 1699 ntBASIC15.81■□□□□ 0.12
CLK1P49759 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.81■□□□□ 0.12
CLK1P49759 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.81■□□□□ 0.12
CLK1P49759 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLK1P49759 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLK1P49759 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.8■□□□□ 0.12
CLK1P49759 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.8■□□□□ 0.12
CLK1P49759 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLK1P49759 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.8■□□□□ 0.12
CLK1P49759 KRT8P10-201ENST00000450021 1447 ntBASIC15.8■□□□□ 0.12
CLK1P49759 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 AC003669.1-201ENST00000334569 611 ntBASIC15.8■□□□□ 0.12
CLK1P49759 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.8■□□□□ 0.12
CLK1P49759 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.8■□□□□ 0.12
CLK1P49759 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.8■□□□□ 0.12
CLK1P49759 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
CLK1P49759 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.8■□□□□ 0.12
CLK1P49759 STK25P1-201ENST00000585406 838 ntBASIC15.8■□□□□ 0.12
CLK1P49759 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.8■□□□□ 0.12
CLK1P49759 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.8■□□□□ 0.12
CLK1P49759 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.8■□□□□ 0.12
CLK1P49759 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.8■□□□□ 0.12
CLK1P49759 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.8■□□□□ 0.12
CLK1P49759 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.8■□□□□ 0.12
CLK1P49759 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CLK1P49759 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.8■□□□□ 0.12
CLK1P49759 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLK1P49759 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms