Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 AP003733.1-201ENST00000491725 852 ntBASIC13.29□□□□□ -0.28
CDC34P49427 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC34P49427 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.29□□□□□ -0.28
CDC34P49427 MIR4651-201ENST00000582622 73 ntBASIC13.29□□□□□ -0.28
CDC34P49427 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.29□□□□□ -0.28
CDC34P49427 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CDC34P49427 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CDC34P49427 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 AL603832.2-201ENST00000566195 2125 ntBASIC13.28□□□□□ -0.28
CDC34P49427 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 ID1-201ENST00000376105 1233 ntBASIC13.28□□□□□ -0.28
CDC34P49427 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CDC34P49427 AC007967.3-201ENST00000434308 558 ntBASIC13.28□□□□□ -0.28
CDC34P49427 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.28□□□□□ -0.28
CDC34P49427 RASA4DP-201ENST00000460726 1199 ntBASIC13.28□□□□□ -0.28
CDC34P49427 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CDC34P49427 GCSHP2-201ENST00000560971 527 ntBASIC13.28□□□□□ -0.28
CDC34P49427 STK25P1-201ENST00000585406 838 ntBASIC13.28□□□□□ -0.28
CDC34P49427 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
CDC34P49427 AC079602.3-201ENST00000623931 403 ntBASIC13.28□□□□□ -0.28
CDC34P49427 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.28□□□□□ -0.28
CDC34P49427 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CDC34P49427 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
CDC34P49427 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC34P49427 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC34P49427 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC34P49427 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms