Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GABRA4P48169 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.81■□□□□ 0.12
GABRA4P48169 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.81■□□□□ 0.12
GABRA4P48169 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GABRA4P48169 AC142381.1-201ENST00000426099 345 ntBASIC15.81■□□□□ 0.12
GABRA4P48169 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GABRA4P48169 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GABRA4P48169 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.81■□□□□ 0.12
GABRA4P48169 FOXO1B-201ENST00000504678 1527 ntBASIC15.81■□□□□ 0.12
GABRA4P48169 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.81■□□□□ 0.12
GABRA4P48169 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GABRA4P48169 SLC25A39P2-201ENST00000537614 270 ntBASIC15.81■□□□□ 0.12
GABRA4P48169 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.81■□□□□ 0.12
GABRA4P48169 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.81■□□□□ 0.12
GABRA4P48169 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
GABRA4P48169 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GABRA4P48169 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.81■□□□□ 0.12
GABRA4P48169 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.81■□□□□ 0.12
GABRA4P48169 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GABRA4P48169 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.81■□□□□ 0.12
GABRA4P48169 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.81■□□□□ 0.12
GABRA4P48169 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GABRA4P48169 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GABRA4P48169 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.8■□□□□ 0.12
GABRA4P48169 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.8■□□□□ 0.12
GABRA4P48169 UXT-AS1-201ENST00000590504 1525 ntBASIC15.8■□□□□ 0.12
GABRA4P48169 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GABRA4P48169 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.8■□□□□ 0.12
GABRA4P48169 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.8■□□□□ 0.12
GABRA4P48169 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GABRA4P48169 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.8■□□□□ 0.12
GABRA4P48169 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GABRA4P48169 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.8■□□□□ 0.12
GABRA4P48169 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.8■□□□□ 0.12
GABRA4P48169 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.8■□□□□ 0.12
GABRA4P48169 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.8■□□□□ 0.12
GABRA4P48169 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.8■□□□□ 0.12
GABRA4P48169 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 AC015911.4-201ENST00000588022 1070 ntBASIC15.8■□□□□ 0.12
GABRA4P48169 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.8■□□□□ 0.12
GABRA4P48169 AP001059.3-201ENST00000619053 235 ntBASIC15.8■□□□□ 0.12
GABRA4P48169 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.8■□□□□ 0.12
GABRA4P48169 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 AC078925.2-201ENST00000624013 1973 ntBASIC15.8■□□□□ 0.12
GABRA4P48169 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
GABRA4P48169 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
GABRA4P48169 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GABRA4P48169 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GABRA4P48169 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GABRA4P48169 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.79■□□□□ 0.12
GABRA4P48169 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.79■□□□□ 0.12
GABRA4P48169 RBPMS2P1-201ENST00000437762 623 ntBASIC15.79■□□□□ 0.12
GABRA4P48169 SPDYE14P-201ENST00000442619 822 ntBASIC15.79■□□□□ 0.12
GABRA4P48169 HLA-J-202ENST00000469281 1241 ntBASIC15.79■□□□□ 0.12
GABRA4P48169 CYMP-203ENST00000474680 1263 ntBASIC15.79■□□□□ 0.12
GABRA4P48169 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.79■□□□□ 0.12
GABRA4P48169 AC004449.1-201ENST00000564240 433 ntBASIC15.79■□□□□ 0.12
GABRA4P48169 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.79■□□□□ 0.12
GABRA4P48169 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.79■□□□□ 0.12
GABRA4P48169 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.79■□□□□ 0.12
GABRA4P48169 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
GABRA4P48169 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
GABRA4P48169 AC006538.1-201ENST00000567905 1585 ntBASIC15.79■□□□□ 0.12
GABRA4P48169 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.79■□□□□ 0.12
GABRA4P48169 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GABRA4P48169 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
GABRA4P48169 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GABRA4P48169 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GABRA4P48169 RNF216P1-203ENST00000404404 2427 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms