Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC1A1P43005 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 AC073621.1-201ENST00000392730 636 ntBASIC17.53■□□□□ 0.4
SLC1A1P43005 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC1A1P43005 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SLC1A1P43005 HCG4-201ENST00000418983 998 ntBASIC17.53■□□□□ 0.4
SLC1A1P43005 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC1A1P43005 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.53■□□□□ 0.4
SLC1A1P43005 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC1A1P43005 AC087641.1-201ENST00000557561 1021 ntBASIC17.53■□□□□ 0.4
SLC1A1P43005 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC1A1P43005 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC1A1P43005 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC1A1P43005 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC1A1P43005 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC1A1P43005 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC1A1P43005 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.52■□□□□ 0.4
SLC1A1P43005 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC1A1P43005 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC1A1P43005 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC1A1P43005 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC1A1P43005 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC1A1P43005 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC1A1P43005 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 AC136632.2-201ENST00000512891 861 ntBASIC17.52■□□□□ 0.4
SLC1A1P43005 OR7E14P-202ENST00000530490 1290 ntBASIC17.52■□□□□ 0.4
SLC1A1P43005 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC1A1P43005 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC1A1P43005 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC1A1P43005 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC1A1P43005 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC1A1P43005 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC1A1P43005 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC1A1P43005 LINC01144-201ENST00000626198 1710 ntBASIC17.52■□□□□ 0.39
SLC1A1P43005 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC1A1P43005 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC1A1P43005 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SLC1A1P43005 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC1A1P43005 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC1A1P43005 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.52■□□□□ 0.39
SLC1A1P43005 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SLC1A1P43005 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC1A1P43005 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC1A1P43005 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC1A1P43005 GPAA1P2-202ENST00000606848 1787 ntBASIC17.51■□□□□ 0.39
SLC1A1P43005 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SLC1A1P43005 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC1A1P43005 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC1A1P43005 POU5F1P6-201ENST00000466990 990 ntBASIC17.51■□□□□ 0.39
SLC1A1P43005 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms