Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.64■□□□□ 0.25
HMGCLP35914 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCLP35914 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMGCLP35914 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.64■□□□□ 0.25
HMGCLP35914 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCLP35914 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.64■□□□□ 0.25
HMGCLP35914 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCLP35914 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HMGCLP35914 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGCLP35914 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCLP35914 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
HMGCLP35914 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMGCLP35914 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.64■□□□□ 0.25
HMGCLP35914 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGCLP35914 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HMGCLP35914 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMGCLP35914 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCLP35914 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 GGT3P-204ENST00000453783 1664 ntBASIC16.63■□□□□ 0.25
HMGCLP35914 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCLP35914 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HMGCLP35914 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HMGCLP35914 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.63■□□□□ 0.25
HMGCLP35914 AC112191.1-201ENST00000523689 701 ntBASIC16.63■□□□□ 0.25
HMGCLP35914 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCLP35914 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCLP35914 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCLP35914 MTDHP5-201ENST00000598980 586 ntBASIC16.63■□□□□ 0.25
HMGCLP35914 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCLP35914 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 AC084018.2-201ENST00000613093 2607 ntBASIC16.63■□□□□ 0.25
HMGCLP35914 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCLP35914 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCLP35914 TNRC18P3-201ENST00000441896 2691 ntBASIC16.63■□□□□ 0.25
HMGCLP35914 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCLP35914 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HMGCLP35914 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCLP35914 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HMGCLP35914 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCLP35914 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCLP35914 AC002056.1-201ENST00000395613 760 ntBASIC16.62■□□□□ 0.25
HMGCLP35914 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCLP35914 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCLP35914 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCLP35914 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCLP35914 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HMGCLP35914 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
HMGCLP35914 AL161645.1-201ENST00000622716 1255 ntBASIC16.62■□□□□ 0.25
HMGCLP35914 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
HMGCLP35914 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HMGCLP35914 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCLP35914 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms