Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.58■□□□□ 0.57
CTGFP29279 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTGFP29279 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.58■□□□□ 0.57
CTGFP29279 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTGFP29279 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.58■□□□□ 0.57
CTGFP29279 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.58■□□□□ 0.57
CTGFP29279 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTGFP29279 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CTGFP29279 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTGFP29279 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.58■□□□□ 0.57
CTGFP29279 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CTGFP29279 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.58■□□□□ 0.56
CTGFP29279 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.58■□□□□ 0.56
CTGFP29279 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.58■□□□□ 0.56
CTGFP29279 AC025048.3-201ENST00000590609 569 ntBASIC18.58■□□□□ 0.56
CTGFP29279 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CTGFP29279 AC005702.4-201ENST00000618393 416 ntBASIC18.58■□□□□ 0.56
CTGFP29279 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.58■□□□□ 0.56
CTGFP29279 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTGFP29279 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CTGFP29279 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.57■□□□□ 0.56
CTGFP29279 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 AC020907.1-201ENST00000616460 1350 ntBASIC18.57■□□□□ 0.56
CTGFP29279 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 AC087289.5-201ENST00000586076 3175 ntBASIC18.57■□□□□ 0.56
CTGFP29279 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.57■□□□□ 0.56
CTGFP29279 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.57■□□□□ 0.56
CTGFP29279 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.57■□□□□ 0.56
CTGFP29279 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTGFP29279 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.57■□□□□ 0.56
CTGFP29279 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.57■□□□□ 0.56
CTGFP29279 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.57■□□□□ 0.56
CTGFP29279 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.57■□□□□ 0.56
CTGFP29279 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 SLC25A47P1-201ENST00000531577 414 ntBASIC18.57■□□□□ 0.56
CTGFP29279 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.57■□□□□ 0.56
CTGFP29279 RARRES2P5-201ENST00000564013 466 ntBASIC18.57■□□□□ 0.56
CTGFP29279 AC024267.1-201ENST00000582320 895 ntBASIC18.57■□□□□ 0.56
CTGFP29279 AC233724.13-201ENST00000598383 410 ntBASIC18.57■□□□□ 0.56
CTGFP29279 AC244093.1-201ENST00000610837 814 ntBASIC18.57■□□□□ 0.56
CTGFP29279 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 AIRN-201ENST00000601203 4374 ntBASIC18.57■□□□□ 0.56
CTGFP29279 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CTGFP29279 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.57■□□□□ 0.56
CTGFP29279 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CTGFP29279 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTGFP29279 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CTGFP29279 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.56■□□□□ 0.56
CTGFP29279 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.56■□□□□ 0.56
CTGFP29279 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTGFP29279 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTGFP29279 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.56■□□□□ 0.56
CTGFP29279 HIST3H2BA-201ENST00000436555 524 ntBASIC18.56■□□□□ 0.56
CTGFP29279 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.56■□□□□ 0.56
CTGFP29279 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CTGFP29279 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.56■□□□□ 0.56
CTGFP29279 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.56■□□□□ 0.56
CTGFP29279 AC108725.1-201ENST00000495472 409 ntBASIC18.56■□□□□ 0.56
CTGFP29279 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.56■□□□□ 0.56
CTGFP29279 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.56■□□□□ 0.56
CTGFP29279 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.56■□□□□ 0.56
CTGFP29279 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.56■□□□□ 0.56
CTGFP29279 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CTGFP29279 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms