Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PTPN3P26045 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN3P26045 ME2P1-201ENST00000426028 1970 ntBASIC17.06■□□□□ 0.32
PTPN3P26045 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN3P26045 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN3P26045 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTPN3P26045 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN3P26045 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.06■□□□□ 0.32
PTPN3P26045 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN3P26045 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN3P26045 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN3P26045 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN3P26045 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN3P26045 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.06■□□□□ 0.32
PTPN3P26045 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PTPN3P26045 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN3P26045 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 AC092364.2-201ENST00000596710 2692 ntBASIC17.06■□□□□ 0.32
PTPN3P26045 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 AC012569.1-201ENST00000591191 1524 ntBASIC17.06■□□□□ 0.32
PTPN3P26045 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN3P26045 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN3P26045 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN3P26045 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN3P26045 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN3P26045 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 CRYGEP-201ENST00000412192 528 ntBASIC17.05■□□□□ 0.32
PTPN3P26045 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PTPN3P26045 HCG4B-203ENST00000450128 991 ntBASIC17.05■□□□□ 0.32
PTPN3P26045 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN3P26045 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN3P26045 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN3P26045 Z83851.2-201ENST00000609564 659 ntBASIC17.05■□□□□ 0.32
PTPN3P26045 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN3P26045 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN3P26045 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN3P26045 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTPN3P26045 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN3P26045 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN3P26045 PCDH8P1-201ENST00000428983 2773 ntBASIC17.05■□□□□ 0.32
PTPN3P26045 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN3P26045 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN3P26045 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN3P26045 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN3P26045 TNRC18P3-201ENST00000441896 2691 ntBASIC17.04■□□□□ 0.32
PTPN3P26045 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN3P26045 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN3P26045 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN3P26045 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN3P26045 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN3P26045 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN3P26045 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN3P26045 FDX1P1-201ENST00000449115 551 ntBASIC17.04■□□□□ 0.32
PTPN3P26045 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms