Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.13□□□□□ -0.15
COL8A2P25067 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
COL8A2P25067 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
COL8A2P25067 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
COL8A2P25067 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
COL8A2P25067 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.13□□□□□ -0.15
COL8A2P25067 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.13□□□□□ -0.15
COL8A2P25067 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.13□□□□□ -0.15
COL8A2P25067 TSEN15P1-201ENST00000423257 515 ntBASIC14.13□□□□□ -0.15
COL8A2P25067 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.13□□□□□ -0.15
COL8A2P25067 AL592309.1-201ENST00000443127 649 ntBASIC14.13□□□□□ -0.15
COL8A2P25067 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 AC079140.1-201ENST00000508039 487 ntBASIC14.13□□□□□ -0.15
COL8A2P25067 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.13□□□□□ -0.15
COL8A2P25067 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.13□□□□□ -0.15
COL8A2P25067 AC004449.1-201ENST00000564240 433 ntBASIC14.13□□□□□ -0.15
COL8A2P25067 AL135744.1-201ENST00000565098 629 ntBASIC14.13□□□□□ -0.15
COL8A2P25067 RARRES2P8-201ENST00000566335 367 ntBASIC14.13□□□□□ -0.15
COL8A2P25067 MIR4492-201ENST00000581627 80 ntBASIC14.13□□□□□ -0.15
COL8A2P25067 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.13□□□□□ -0.15
COL8A2P25067 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.13□□□□□ -0.15
COL8A2P25067 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.13□□□□□ -0.15
COL8A2P25067 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COL8A2P25067 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.13□□□□□ -0.15
COL8A2P25067 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.13□□□□□ -0.15
COL8A2P25067 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COL8A2P25067 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
COL8A2P25067 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COL8A2P25067 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COL8A2P25067 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COL8A2P25067 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.12□□□□□ -0.15
COL8A2P25067 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
COL8A2P25067 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL8A2P25067 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COL8A2P25067 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.12□□□□□ -0.15
COL8A2P25067 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 RNU1-129P-201ENST00000384064 167 ntBASIC14.12□□□□□ -0.15
COL8A2P25067 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.12□□□□□ -0.15
COL8A2P25067 AL645939.2-201ENST00000427340 991 ntBASIC14.12□□□□□ -0.15
COL8A2P25067 AC005237.2-201ENST00000434368 219 ntBASIC14.12□□□□□ -0.15
COL8A2P25067 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.12□□□□□ -0.15
COL8A2P25067 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.12□□□□□ -0.15
COL8A2P25067 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.12□□□□□ -0.15
COL8A2P25067 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.12□□□□□ -0.15
COL8A2P25067 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.12□□□□□ -0.15
COL8A2P25067 U1.21-201ENST00000580816 167 ntBASIC14.12□□□□□ -0.15
COL8A2P25067 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.12□□□□□ -0.15
COL8A2P25067 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 CYP2A7P1-201ENST00000595391 815 ntBASIC14.12□□□□□ -0.15
COL8A2P25067 AL031055.1-201ENST00000606362 631 ntBASIC14.12□□□□□ -0.15
COL8A2P25067 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.12□□□□□ -0.15
COL8A2P25067 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COL8A2P25067 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms