Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.89■□□□□ 0.29
XPAP23025 AL645608.8-201ENST00000606034 2086 ntBASIC16.89■□□□□ 0.29
XPAP23025 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.89■□□□□ 0.29
XPAP23025 SLC22A20-204ENST00000530038 1673 ntBASIC16.89■□□□□ 0.29
XPAP23025 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.89■□□□□ 0.29
XPAP23025 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.89■□□□□ 0.29
XPAP23025 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 AC140658.5-201ENST00000438532 169 ntBASIC16.89■□□□□ 0.29
XPAP23025 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.89■□□□□ 0.29
XPAP23025 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.89■□□□□ 0.29
XPAP23025 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.89■□□□□ 0.29
XPAP23025 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
XPAP23025 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.89■□□□□ 0.29
XPAP23025 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.89■□□□□ 0.29
XPAP23025 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.89■□□□□ 0.29
XPAP23025 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.89■□□□□ 0.29
XPAP23025 SNHG9-202ENST00000564014 471 ntBASIC16.89■□□□□ 0.29
XPAP23025 AP002472.1-201ENST00000577490 586 ntBASIC16.89■□□□□ 0.29
XPAP23025 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.89■□□□□ 0.29
XPAP23025 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.89■□□□□ 0.29
XPAP23025 AC134684.3-201ENST00000641758 218 ntBASIC16.89■□□□□ 0.29
XPAP23025 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 AC108860.2-201ENST00000562760 2183 ntBASIC16.89■□□□□ 0.29
XPAP23025 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
XPAP23025 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.89■□□□□ 0.29
XPAP23025 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XPAP23025 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.88■□□□□ 0.29
XPAP23025 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.88■□□□□ 0.29
XPAP23025 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.88■□□□□ 0.29
XPAP23025 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.88■□□□□ 0.29
XPAP23025 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
XPAP23025 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.88■□□□□ 0.29
XPAP23025 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.88■□□□□ 0.29
XPAP23025 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.88■□□□□ 0.29
XPAP23025 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.88■□□□□ 0.29
XPAP23025 CYP2A7P1-201ENST00000595391 815 ntBASIC16.88■□□□□ 0.29
XPAP23025 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
XPAP23025 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
XPAP23025 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
XPAP23025 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.88■□□□□ 0.29
XPAP23025 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XPAP23025 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
XPAP23025 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
XPAP23025 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
XPAP23025 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
XPAP23025 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.87■□□□□ 0.29
XPAP23025 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.87■□□□□ 0.29
XPAP23025 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.87■□□□□ 0.29
XPAP23025 AL031055.1-201ENST00000606362 631 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms