Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL1P22362 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCL1P22362 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
CCL1P22362 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.4□□□□□ -0.1
CCL1P22362 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.4□□□□□ -0.1
CCL1P22362 DUSP5P1-201ENST00000441325 1139 ntBASIC14.4□□□□□ -0.1
CCL1P22362 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL1P22362 AC020765.3-201ENST00000613051 740 ntBASIC14.4□□□□□ -0.1
CCL1P22362 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCL1P22362 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CCL1P22362 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL1P22362 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL1P22362 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL1P22362 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
CCL1P22362 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 AL603832.2-201ENST00000566195 2125 ntBASIC14.39□□□□□ -0.11
CCL1P22362 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 RPS2P1-201ENST00000434010 821 ntBASIC14.39□□□□□ -0.11
CCL1P22362 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL1P22362 AC073648.2-201ENST00000510116 352 ntBASIC14.39□□□□□ -0.11
CCL1P22362 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL1P22362 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL1P22362 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.39□□□□□ -0.11
CCL1P22362 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL1P22362 IFNL4P1-201ENST00000607083 540 ntBASIC14.39□□□□□ -0.11
CCL1P22362 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.39□□□□□ -0.11
CCL1P22362 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 AC008735.5-201ENST00000623544 497 ntBASIC14.39□□□□□ -0.11
CCL1P22362 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL1P22362 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL1P22362 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCL1P22362 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL1P22362 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL1P22362 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL1P22362 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms