Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 AP001350.2-201ENST00000625104 1094 ntBASIC17.03■□□□□ 0.32
NFKB1P19838 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
NFKB1P19838 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NFKB1P19838 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFKB1P19838 AC092364.2-201ENST00000596710 2692 ntBASIC17.03■□□□□ 0.32
NFKB1P19838 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.02■□□□□ 0.32
NFKB1P19838 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.02■□□□□ 0.32
NFKB1P19838 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.02■□□□□ 0.32
NFKB1P19838 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.02■□□□□ 0.32
NFKB1P19838 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 AL031731.1-201ENST00000642131 2094 ntBASIC17.02■□□□□ 0.32
NFKB1P19838 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.02■□□□□ 0.32
NFKB1P19838 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NFKB1P19838 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.02■□□□□ 0.32
NFKB1P19838 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.02■□□□□ 0.32
NFKB1P19838 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.02■□□□□ 0.32
NFKB1P19838 VN2R19P-201ENST00000442399 1052 ntBASIC17.02■□□□□ 0.32
NFKB1P19838 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.02■□□□□ 0.32
NFKB1P19838 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.02■□□□□ 0.32
NFKB1P19838 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.02■□□□□ 0.32
NFKB1P19838 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NFKB1P19838 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.02■□□□□ 0.32
NFKB1P19838 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.02■□□□□ 0.32
NFKB1P19838 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.02■□□□□ 0.32
NFKB1P19838 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFKB1P19838 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NFKB1P19838 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFKB1P19838 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.02■□□□□ 0.31
NFKB1P19838 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFKB1P19838 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.02■□□□□ 0.31
NFKB1P19838 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NFKB1P19838 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFKB1P19838 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFKB1P19838 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.02■□□□□ 0.31
NFKB1P19838 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.02■□□□□ 0.31
NFKB1P19838 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NFKB1P19838 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFKB1P19838 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.01■□□□□ 0.31
NFKB1P19838 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NFKB1P19838 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NFKB1P19838 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 GGT3P-204ENST00000453783 1664 ntBASIC17.01■□□□□ 0.31
NFKB1P19838 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.01■□□□□ 0.31
NFKB1P19838 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NFKB1P19838 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NFKB1P19838 CRYGEP-201ENST00000412192 528 ntBASIC17.01■□□□□ 0.31
NFKB1P19838 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
NFKB1P19838 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.01■□□□□ 0.31
NFKB1P19838 Z83851.2-201ENST00000609564 659 ntBASIC17.01■□□□□ 0.31
NFKB1P19838 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.01■□□□□ 0.31
NFKB1P19838 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.01■□□□□ 0.31
NFKB1P19838 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.01■□□□□ 0.31
NFKB1P19838 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.01■□□□□ 0.31
NFKB1P19838 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 AC006449.5-201ENST00000610658 2098 ntBASIC17.01■□□□□ 0.31
NFKB1P19838 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 GGT4P-201ENST00000623672 1708 ntBASIC17.01■□□□□ 0.31
NFKB1P19838 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFKB1P19838 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NFKB1P19838 AC012569.1-201ENST00000591191 1524 ntBASIC17.01■□□□□ 0.31
NFKB1P19838 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms