Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NCLP19338 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCLP19338 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.02■□□□□ 0.79
NCLP19338 AL513523.2-202ENST00000427283 2040 ntBASIC20.02■□□□□ 0.79
NCLP19338 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.02■□□□□ 0.79
NCLP19338 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.02■□□□□ 0.79
NCLP19338 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NCLP19338 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.02■□□□□ 0.79
NCLP19338 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NCLP19338 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.01■□□□□ 0.79
NCLP19338 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 AP002414.2-201ENST00000591780 3365 ntBASIC20.01■□□□□ 0.79
NCLP19338 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NCLP19338 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.01■□□□□ 0.79
NCLP19338 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NCLP19338 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.01■□□□□ 0.79
NCLP19338 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.01■□□□□ 0.79
NCLP19338 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.01■□□□□ 0.79
NCLP19338 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.01■□□□□ 0.79
NCLP19338 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
NCLP19338 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.01■□□□□ 0.79
NCLP19338 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NCLP19338 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCLP19338 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
NCLP19338 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20■□□□□ 0.79
NCLP19338 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC20■□□□□ 0.79
NCLP19338 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 TK2-221ENST00000620035 5060 ntTSL 2 BASIC20■□□□□ 0.79
NCLP19338 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 AC124947.2-201ENST00000547118 1133 ntBASIC20■□□□□ 0.79
NCLP19338 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20■□□□□ 0.79
NCLP19338 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20■□□□□ 0.79
NCLP19338 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20■□□□□ 0.79
NCLP19338 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20■□□□□ 0.79
NCLP19338 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC20■□□□□ 0.79
NCLP19338 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20■□□□□ 0.79
NCLP19338 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NCLP19338 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 KRT18P1-202ENST00000452408 1331 ntBASIC20■□□□□ 0.79
NCLP19338 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCLP19338 AC092850.2-201ENST00000623821 2697 ntBASIC19.99■□□□□ 0.79
NCLP19338 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.99■□□□□ 0.79
NCLP19338 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NCLP19338 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.99■□□□□ 0.79
NCLP19338 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCLP19338 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NCLP19338 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC19.99■□□□□ 0.79
NCLP19338 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCLP19338 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCLP19338 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.99■□□□□ 0.79
NCLP19338 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NCLP19338 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.99■□□□□ 0.79
NCLP19338 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCLP19338 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCLP19338 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.99■□□□□ 0.79
NCLP19338 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.99■□□□□ 0.79
NCLP19338 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.99■□□□□ 0.79
NCLP19338 DRAXINP1-201ENST00000437611 948 ntBASIC19.99■□□□□ 0.79
NCLP19338 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.99■□□□□ 0.79
NCLP19338 TPSP2-201ENST00000561760 610 ntBASIC19.99■□□□□ 0.79
NCLP19338 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NCLP19338 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.99■□□□□ 0.79
NCLP19338 AL121894.2-201ENST00000602977 491 ntBASIC19.99■□□□□ 0.79
NCLP19338 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.99■□□□□ 0.79
NCLP19338 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCLP19338 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms